
Genomics
- Complete microarray and sequencing services
- Support for CIC and external users
- Certified quality and safety management systems
6 scientific & technical platforms
CIC’s Core Facilities provide specialized scientific and technical support across genomics, proteomics, advanced cellular analyses, pathology, bioinformatics and mouse model experimentation.
The Core Facilities section brings together six scientific and technical platforms that support CIC research groups and external users through specialized technologies, experimental workflows, data analysis and research services.






The Genomics Unit provides comprehensive support for genetic material analysis, offering services such as DNA sequencing, gene expression profiling, and genotyping.
The facility is equipped to analyze RNA and DNA samples using advanced technologies to ensure high-quality and reproducible results.
The Unit offers support to both CIC and external users, managing the complete analytical process from the experimental sample to technical advice, experimental design and quality control.
Service counts by year. Full figures are in the table below.
Genomics: Sequencing — 2024 8,661, 2025 5,729; Agilent — 2024 754, 2025 634; Affymetrix genotyping and expression profile — 2024 180, 2025 131.
| Service | 2024 | 2025 |
|---|---|---|
| Sequencing | 8,661 | 5,729 |
| Agilent | 754 | 634 |
| Affymetrix genotyping and expression profile | 180 | 131 |

The Proteomics Unit offers access to cutting-edge platforms for the comprehensive study and identification of proteins and peptides.
Its services cover protein identification and quantification, comparative proteomics, analysis of post-translational modifications and investigation of protein–protein interactions.
The Unit provides advice and support during experimental design, sample preparation, nano-LC separation, tandem mass spectrometry analysis and comprehensive data analysis.
For quantitative proteomics, the Unit offers both label-free approaches and isotopic labeling methods, including SILAC.
Service counts by year. Full figures are in the table below.
Proteomics — Services by year: 2024 73, 2025 61.
| Service | 2024 | 2025 |
|---|---|---|
| Services | 73 | 61 |

The Advanced Cellular Analyses Unit provides researchers with cutting-edge imaging and cytometry technologies for cellular and molecular studies.
Microscopy services cover widefield, confocal laser scanning, nanoscopy and mesoscopy, supporting both fixed and live-cell imaging.
Advanced applications include super-resolution imaging such as STED, TIRF-M and PALM/STORM, as well as molecular interaction studies by FLIM-FRET and crossN&B.
The Unit also offers high-performance flow cytometry services, including multiparametric cell analysis and fluorescence-activated cell sorting.
The Unit is open to CIC research groups and external institutions, offering technical support, training and consultation.
Service counts by year. Full figures are in the table below.
Advanced Cellular Analyses: Confocal — 2024 546, 2025 611; Cytometry — 2024 848, 2025 469; In vivo — 2024 68, 2025 55.
| Service | 2024 | 2025 |
|---|---|---|
| Confocal | 546 | 611 |
| Cytometry | 848 | 469 |
| In vivo | 68 | 55 |

The Pathology Unit specializes in the histological, immunohistochemical and molecular analysis of human, animal and plant tissue samples.
The Unit offers services tailored to researchers’ needs, including routine tissue staining, immunohistochemistry, multiplexing, tissue microarrays and laser microdissection microscopy.
Histopathology services include tissue processing, paraffin embedding, sectioning and hematoxylin-eosin staining for morphological evaluation.
Laser microdissection technology enables the isolation of specific cells from complex tissues for molecular characterization.
The Unit contributes to education and training, student mentorship programs and collaborative research initiatives.
Service counts by year. Full figures are in the table below.
Pathology: Internal — 2024 571, 2025 538; External — 2024 674, 2025 631.
| Service | 2024 | 2025 |
|---|---|---|
| Internal | 571(4,741 samples) | 538(4,865 samples) |
| External | 674(6,385 samples) | 631(6,232 samples) |
Sample values are provided in parentheses in the source report.
The Bioinformatics Unit works at CIC with the help and support of the Bioinformatics and Functional Genomics Research Group.
The Unit provides specialized computational analysis services to support research in genomics, transcriptomics, proteomics and other omics disciplines.
The team assists scientists in data processing, interpretation and integration, applying advanced bioinformatics tools to extract meaningful insights from complex biological datasets.
The Unit has extensive expertise in high-throughput sequencing data analysis, including RNA-Seq, whole-genome sequencing and custom panel analysis.
Since its establishment in 2008, the Unit has analysed over 5,000 datasets from diverse experimental platforms, supporting both academic and industry projects.
Service counts by year. Full figures are in the table below.
Bioinformatics — Data analysis by year: 2022 55, 2023 46.
| Service | 2022 | 2023 |
|---|---|---|
| Data analysis | 55 | 46 |
The source report shows this service table for 2022 and 2023, not for 2024 and 2025.

The Mouse Model Experimentation Unit (UEMM) offers comprehensive support to CIC users conducting research with mouse models.
During this period, the Unit was staffed by two full-time technicians with over 15 and 5 years of experience, respectively, as well as two technicians from the Youth Guarantee Program of the Junta de Castilla y León.
The Unit uses a weekly task request system, allowing users to specify required tasks in advance.
The UEMM maintains the mouse colony management software Raton Manager, which houses detailed information on all mouse colonies.
For genotyping services, the Unit provides a photograph of the gel and a detailed report including mouse number, sex, weaning cage and parentage.
| Service | 2024 (since May) | 2025 |
|---|---|---|
| Crosses | 287 | 458 |
| Crosses for MEFs | 78 | 49 |
| Tagging | 10,371 | 12,870 |
| IP | 161 | 682 |
| IV | 23 | 32 |
| SC | 678 | 16 |
| Oral gavage | 39 | 628 |
| Venipuncture | 2,698 | 12 |
| Euthanasia | — | 4,831 |
The 2024 row is marked as 'since May' in the source. The source table leaves Euthanasia blank for 2024; it is represented as null (rendered as 'Not provided'), never as 0.
| Service | 2024 (since May) | 2025 |
|---|---|---|
| DNA extraction | 2,363 | 2,948 |
| DNA Extraction + Genotyping by PCR | 5,705 | 6,075 |
The 2024 row is marked as 'since May' in the source.